John Meredith
Project Personnel, University of California, San Diego
2 active projects
Smoking Rare Variants
Scientific Questions Being Studied
The goal of this workspace is to explore the role that rare variants play in the genetics of smoking phenotypes
Project Purpose(s)
- Disease Focused Research (Tobacco Use Disorder)
- Ancestry
Scientific Approaches
We will be using whole genome data and various rare variant analysis tools to explore the role that rare variants play in smoking phenotypes
Anticipated Findings
We hope to see that rare variants play a strong role in the genetics of smoking traits and open to door for further analysis
Demographic Categories of Interest
This study will not center on underrepresented populations.
Data Set Used
Controlled Tier
Duplicate of How to Work with All of Us Genomic Data (Hail - Plink)(v7)
Scientific Questions Being Studied
Not applicable - these notebooks demonstrate example analysis how to use Hail and PLINK to perform genome-wide association studies using the All of Us genomic data and phenotypic data.
Project Purpose(s)
- Other Purpose (Demonstrate to the All of Us Researcher Workbench users how to get started with the All of Us genomic data and tools. It includes an overview of all the All of Us genomic data and shows some simple examples on how to use these data.)
Scientific Approaches
Not applicable - these notebooks demonstrate example analysis how to use Hail and PLINK to perform genome-wide association studies using the All of Us genomic data and phenotypic data.
Anticipated Findings
Not applicable - these notebooks demonstrate example analysis how to use Hail and PLINK to perform genome-wide association studies using the All of Us genomic data and phenotypic data.
Demographic Categories of Interest
This study will not center on underrepresented populations.
Data Set Used
Controlled TierRequest a Review of this Research Project
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